- An introduction to protein
structure. [PPT] [PDF]
- The Central Dogma
- Protein Structure
- Primary Structure
- Secondary Structure
- More on protein structure. [PPT] [PDF]
- Higher Order Structure
- Denatured States
- Thermodynamics and Proteins [PPT] [PDF]
- Thermodynamics according to proteins
- Electrostatics
- van der Waals
- Hydrogen Exchange in Proteins and Nucleic
Acids [PPT] [PDF]
- "Thermodynamics, kinetics, and structure all
from one little proton"
- Protein Folding: It's a Problem [PPT] [PDF]
- Kinetics/mechanism of folding
- Predicting structure from sequence
- Spectroscopy, Absorbance, and Fluorescence
[PPT] [PDF]
- Predicting Structure Using Folding
(2007) [PPT] [PDF]
- Sedimentation Analysis, Electrostatics,
Binding [PPT] [PDF]
- Principles of macromolecular sedimentation
analysis
- Molecular Diffusion
- Association and chemical kinetics - Eyring and
Kramer
- Electrostatic guiding: Poisson-Boltzmann,
Debye-Huckel Screening
- Ligand Binding and Linked Equilibrium
- Small Angle X-ray Scattering (SAXS)
[PPT] [PDF]
- An introduction to nucleic acids [PPT] [PDF]
- Nucleic acid structure
- Protein - DNA interactions
- DNA replication and Polymerases [PPT] [PDF]
- RNA Folding [PPT] [PDF]
- Sequence to Structure
- Tertiary Motifs
- Thermodynamics of folding
- Methods for studying folding intermediates
- Folding Pathways of RNA and Reduced Contact
Order
- RNA-ion interactions: Surprisingly
complicated [PPT] [PDF]
- Metal requirements for folding
- What about monovalents?
- Counter-ion condensation effect
- Poisson-Boltzmann and its limits
- Thermodynamics, Hill coefficients, and
folding
- Single Molecule and RNA Folding
(2007) [PPT] [PDF]
- DNA: Bending and SuperCoiling [PPT] [PDF]
Posted on January 26, 2009 by baxa |
